BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022F09LP1|AL427933
(1104 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1313 1346 0.0
>3x_Contig1313
Length = 8010
Score = 1346 bits (678), Expect = 0.0
Identities = 738/756 (97%), Gaps = 3/756 (0%)
Strand = Plus / Plus
Query: 346 gctccacttccaacttcaatgtatagaaatcgatcaaatacctcaattgatccttcaaca 405
||||||| |||||||||||| | |||| | ||||||||||||||||||||||||||||
Sbjct: 1905 gctccacacccaacttcaatgaaatgaaacctatcaaatacctcaattgatccttcaaca 1964
Query: 406 cagtttccttcttcttaagtctatcctctttggccaatttctctcttttcctgtctttac 465
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1965 cagtttccttcttcttaagtctatcctctttggccaatttttctcttttcctgtctttac 2024
Query: 466 tcttttttgcaactttgttgc-agtgcttttactatccgcattgccacctctaataatcc 524
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 2025 tcttttttgcaactttgttgccagtgcttttactatccgcattgccacctctaataatcc 2084
Query: 525 ttctcttctctttcttcgaaagtgaaccgttggaaagatgtgtagacacaatgagtgagt 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2085 ttctcttctctttcttcgaaagtgaaccgttggaaagatgtgtagacacaatgagtgagt 2144
Query: 585 gtagctcatcatcgatctgattcccttcctctgacttcttgatctggaaccttttccaag 644
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2145 ctagctcatcatcgatctgattcccttcctctgacttcttgatctggaaccttttccaag 2204
Query: 645 caggtacgtgttccgacatcttaatatattgtttattgctgtgttgctatatttctatga 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2205 caggtacgtgttccgacatcttaatatattgtttattgctgtgttgctatatttctatga 2264
Query: 705 tattaacagagccagtgatagtttctacagttcagatatactctgtatactatctcatct 764
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2265 tattaacagagccagtaatagtttctacagttcagatatactctgtatactatctcatct 2324
Query: 765 catctcatctcatctaaagctcttcttttcaccaaattttcagctcagtttttcaaaaag 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2325 catctcatctcatctaaagctcttcttttcaccaaattttcagctcagtttttcaaaaag 2384
Query: 825 aaatactttatttactatgggaaaaaagattcaaatggactcaatgaactttgaactcgt 884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2385 aaatactttatttactatgggaaaaaagattcaaatggactcaatgaactttgaactcgt 2444
Query: 885 atgtwccactttatattctcatctcgaatgatattttctgacatatgatttcgtttttag 944
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2445 atgtaccactttatattctcatctcgaatgatattttctgacatatgatttcgtttttag 2504
Query: 945 tctaccaatcataaacttattgctcggctgggtctcatcgtttggktcagactactgtgt 1004
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2505 tctaccaatcataaacttattgctcggctgggtctcatcgtttggttcagactactgtgt 2564
Query: 1005 tggacttgagaggattttcttctcttgttttattcaacgggtagtatttctgttctcgag 1064
|||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct: 2565 tggacttgagaggattttcttctcttgttttattcaacggttagtatttctgtcctcgag 2624
Query: 1065 aatcaataattggggcctgagcatagactgaaawac 1100
|||| |||||| ||||||||||||||||||||| ||
Sbjct: 2625 aatc-ataatt-gggcctgagcatagactgaaatac 2658
Score = 447 bits (225), Expect = e-125
Identities = 246/253 (97%)
Strand = Plus / Plus
Query: 1 tctcttgatctttggatgcttctgtagcttctcccagcacaatcttagccatttcctctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1560 tctcttgatctttggatgcttctgtagcttctcccagcacaatcttagccatttcctctt 1619
Query: 61 tctgctgctctagatatttattttgcttctcgataacatccaaacaactttcttgtagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1620 tctgctgctctagatatttattttgcttctcgataacatccaaacaactttcttgtagct 1679
Query: 121 gagccttcgaaccaccctgtaagtcctggaaatatctcactaatagcgggttgaatgctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1680 gagccttcgaaccaccctgtaagtcctggaaatatctcactaatagcgggttgaatgctg 1739
Query: 181 atgggatctcatcagtgataacgaaatgtttgatgagccaattctgtttctgtttactga 240
||||||||||||||||||| ||||||||||||||||||||| |||| |||||| |||||
Sbjct: 1740 atgggatctcatcagtgattacgaaatgtttgatgagccaagtctgggtctgttaactga 1799
Query: 241 acttccatacatc 253
||| ||| |||||
Sbjct: 1800 actgccacacatc 1812
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,686
Number of Sequences: 1807
Number of extensions: 10686
Number of successful extensions: 554
Number of sequences better than 1.0e-20: 1
length of query: 1104
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1088
effective length of database: 10,329,639
effective search space: 11238647232
effective search space used: 11238647232
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.8 bits)